Adapter Predict¶

Predicts the barcoded adapter sequence range used in a given file.

Run Using¶

produse adapter_predict

or

python /path/to/ProDuSe/ProDuSe/adapter_predict.py

-i –input: Paired fastq files. Two files must be specified.

-m –max_adapter_length:

Limit the adapter sequence prediction to this length

Warning

Ensure your samples are de-multiplexed prior to running Adapter Predict. The adapter sequence is predicted from ALL reads in the fastq files.